plantR

By Renato Lima, Andrea Sánchez-Tapia, Sara Mortara, Marinez F Siqueira, Hans van ter Steege in biodiversity informatics open science project R R packages

plantR includes tools to (a) download records from different data repositories, (b) standardise typical fields associated with species records, (c) validate the locality, geographical coordinates, taxonomic nomenclature and species identifications, including the retrieval of duplicates across collections, and (d) summarise and export records, including the construction of species lists with vouchers.

GitHub repo: https://github.com/LimaRAF/plantR

You can install it from GitHub:

remotes::install_github("LimaRAF/plantR")

Publications:

de Lima, R.A.F., Sánchez-Tapia, A., Mortara, S.R., ter Steege, H., de Siqueira, M.F., 2021. plantR: An R package and workflow for managing species records from biological collections. Methods in Ecology and Evolution n/a. https://doi.org/10.1111/2041-210X.13779

Posted on:
December 3, 2021
Length:
1 minute read, 96 words
Categories:
biodiversity informatics open science project R R packages
See Also: